BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008E09SP1|AL425881
(817 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1663 1603 0.0
>3x_Contig1663
Length = 13533
Score = 1603 bits (808), Expect = 0.0
Identities = 816/818 (99%), Gaps = 1/818 (0%)
Strand = Plus / Plus
Query: 1 gttcgccttctctacgatattgttcgcgctgagacacagacgaaaaatcgccagattcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1758 gttcgccttctctacgatattgttcgcgctgagacacagacgaaaaatcgccagattcag 1817
Query: 61 caattgtctcataagtagcttgttgtacgtttggtggattgaaaccagctgaagaattat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1818 caattgtctcataagtagcttgttgtacgtttggtggattgaaaccagctgaagaattat 1877
Query: 121 aagcaggtccgttgtaattagcgttttgatacggatgttggtgatttggctggctttggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1878 aagcaggtccgttgtaattagcgttttgatacggatgttggtgatttggctggctttggg 1937
Query: 181 ggtattgtgctttaaagtgggttctaccatgttctgaaggatggccccctggttgtgttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1938 ggtattgtgctttaaagtgggttctaccatgttctgaaggatggccccctggttgtgttg 1997
Query: 241 gcggtagctggtgctgcttaaactgctgatcagcttccggcggagtgtattgttttaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1998 gcggtagctggtgctgcttaaactgctgatcagcttccggcggagtgtattgttttaatg 2057
Query: 301 agtagttaggtccagattccacagtgttggaatagttctcagcgtaattttgctgatacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2058 agtagttaggtccagattccacagtgttggaatagttctcagcgtaattttgctgatacc 2117
Query: 361 tctctggtgttccttgactttgatatctttcaggggaaggatcgaggcgtgctataactg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2118 tctctggtgttccttgactttgatatctttcaggggaaggatcgaggcgtgctataactg 2177
Query: 421 gcaaggcactacctgagctagtttgaggagctagagttcgtacctggctttcgtaattgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2178 gcaaggcactacctgagctagtttgaggagctagagttcgtacctggctttcgtaattgg 2237
Query: 481 ctggtaacgcacctctttggtgattttgggatgacttgacgttagtttcagaaccttcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2238 ctggtaacgcacctctttggtgattttgggatgacttgacgttagtttcagaaccttcat 2297
Query: 541 ttatcaaaggttgacgagctgccggtggataagttctctgataagggttgtctgactgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2298 ttatcaaaggttgacgagctgccggtggataagttctctgataagggttgtctgactgcc 2357
Query: 601 gtataggaggagtagaaggtgaccctgtcatccgttgttcccttgtagatgttggtaagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2358 gtataggaggagtagaaggtgaccctgtcatccgttgttcccttgtagatgttggtaagg 2417
Query: 661 ccgactgagcmatcattggctgcatccgtggagttggagtctgtttcggaagttcttcac 720
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2418 ccgactgagcaatcattggctgcatccgtggagttggagtctgtttcggaagttcttcac 2477
Query: 721 tggatgcattacttgtggtgttttccgtaacgaccaaaggaaccacaggtagatctttt- 779
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2478 tggatgcattacttgtggtgttttccgtaacgaccaaaggaaccacaggtagatcttttc 2537
Query: 780 cccttattttggattcagatgggatggtcgttacatca 817
||||||||||||||||||||||||||||||||||||||
Sbjct: 2538 cccttattttggattcagatgggatggtcgttacatca 2575
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4327
Number of Sequences: 1807
Number of extensions: 4327
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 817
length of database: 10,358,551
effective HSP length: 16
effective length of query: 801
effective length of database: 10,329,639
effective search space: 8274040839
effective search space used: 8274040839
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)